| S# | Rank | Protein Target | Sequence | Score |
|---|---|---|---|---|
| 1 | 1 | RNA-dependent RNA-polymerase (RdRp) | GSERQAKVTSDINRTA | 0.96 |
| 2 | 2 | RNA-dependent RNA-polymerase (RdRp) | HGEIQNSKMKIAVCND | 0.94 |
| 3 | 3 | RNA-dependent RNA-polymerase (RdRp) | EIDIMPPPVFQGKFNY | 0.94 |
| 4 | 4 | RNA-dependent RNA-polymerase (RdRp) | QSEGVMHPTPIKKVLR | 0.93 |
| 5 | 5 | RNA-dependent RNA-polymerase (RdRp) | HPMVDERDAMDAVKLN | 0.93 |
| 6 | 6 | RNA-dependent RNA-polymerase (RdRp) | TEHAQFSTRFRNTLLN | 0.93 |
| 7 | 7 | RNA-dependent RNA-polymerase (RdRp) | VVSVKTRCQMTSLLNG | 0.92 |
| 8 | 8 | RNA-dependent RNA-polymerase (RdRp) | DKAISPPKRLIWSVYP | 0.92 |
| 9 | 9 | RNA-dependent RNA-polymerase (RdRp) | ASTIIDWLEHILNSPK | 0.91 |
| 10 | 10 | RNA-dependent RNA-polymerase (RdRp) | GSKIIESKWLTNKAST | 0.91 |
| 11 | 11 | RNA-dependent RNA-polymerase (RdRp) | KSPWVGSSTQEKKLVP | 0.91 |
| 12 | 12 | RNA-dependent RNA-polymerase (RdRp) | LRIIKGFVDNNKRWPK | 0.90 |
| 13 | 13 | RNA-dependent RNA-polymerase (RdRp) | VILWRKHVLSCRICTT | 0.90 |
| 14 | 14 | RNA-dependent RNA-polymerase (RdRp) | DGFISDHAFMDFKIFL | 0.90 |
| 15 | 15 | RNA-dependent RNA-polymerase (RdRp) | KMRWVYKGTPGLRRLL | 0.90 |
| 16 | 1 | Protein M2-2 | HNYWSWPDRYLLIRSN | 0.93 |
| 17 | 2 | Protein M2-3 | AGREDRTQDFVLGSTN | 0.91 |
| 18 | 3 | Protein M2-4 | LSIISGAGREDRTQDF | 0.91 |
| 19 | 4 | Protein M2-5 | SRKAPCKYEVRGKCNR | 0.90 |
| 20 | 1 | Major Surface Protein | HHTSSPPTESNKEAST | 0.97 |
| 21 | 2 | Major Surface Protein | SQHPTQQSTENPTLNP | 0.91 |
| 22 | 3 | Major Surface Protein | ASTISTDNPDINPNSQ | 0.91 |
| 23 | 4 | Major Surface Protein | TKAIRRATTFRMSSTG | 0.90 |
| 24 | 1 | Fusion Glycoprotein | AKTIRLESEVTAIKNA | 0.92 |
| 25 | 1 | Small Hydrophobic Protein | LQICQSKTESDKEDSP | 0.95 |
| 26 | 2 | Small Hydrophobic Protein | KRLIQRYTDSVINKDT | 0.90 |
| 27 | 3 | Small Hydrophobic Protein | TTSVTTKTTLDHDITQ | 0.90 |
| 28 | 1 | Matrix Protein | HDLIALCDFMDLEKNT | 0.93 |
| 29 | 1 | Phosphoprotein | KKVSFTPNEPGKYTKL | 0.92 |
| 30 | 1 | Nucleoprotein | NQRPSAPDTPIILLCV | 0.93 |
| 31 | 2 | Nucleoprotein | GLGIIGMYRGRVPNTE | 0.92 |
| 32 | 3 | Nucleoprotein | SGNIPQNQRPSAPDTP | 0.92 |
| 33 | 4 | Nucleoprotein | LKESQYTIKRDVGTTT | 0.91 |
| 34 | 5 | Nucleoprotein | CGEILYAKHADYKYAA | 0.90 |