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S# Protein Target Epitope ID Epitope Sequence Affinity Affinity Rescale Cleavage Score Combined Score MHC Binder
1 RNA-dependent RNA-polymerase (RdRp) 1805 CTTYGTDLY 0.6615 2.8088 0.7088 3.0569 Yes
2 RNA-dependent RNA-polymerase (RdRp) 350 NLENAAELY 0.5712 2.4254 0.8149 2.6946 Yes
3 RNA-dependent RNA-polymerase (RdRp) 143 VSNWFSNWY 0.5641 2.3952 0.9036 2.6746 Yes
4 RNA-dependent RNA-polymerase (RdRp) 318 STVLENNDY 0.5149 2.1864 0.3439 2.3885 Yes
5 RNA-dependent RNA-polymerase (RdRp) 1149 ITTCMDVIY 0.4756 2.0191 0.8768 2.2978 Yes
6 RNA-dependent RNA-polymerase (RdRp) 696 KIEEQSGLY 0.4621 1.9618 0.9526 2.2486 Yes
7 RNA-dependent RNA-polymerase (RdRp) 1580 YTDMAHALT 0.4929 2.0929 0.0338 2.0588 Yes
8 RNA-dependent RNA-polymerase (RdRp) 1702 WMARTACEY 0.4281 1.8178 0.1910 2.0053 Yes
9 RNA-dependent RNA-polymerase (RdRp) 760 GLDEVKADY 0.4091 1.7371 0.9646 2.0029 Yes
10 RNA-dependent RNA-polymerase (RdRp) 1720 LKDDLDHHY 0.3648 1.5489 0.9222 1.8301 Yes
11 RNA-dependent RNA-polymerase (RdRp) 423 VLSKRWTMY 0.3486 1.4801 0.9746 1.7814 Yes
12 RNA-dependent RNA-polymerase (RdRp) 1800 LSCRICTTY 0.3422 1.4531 0.9303 1.7439 Yes
13 RNA-dependent RNA-polymerase (RdRp) 1445 ISDHAFMDF 0.3504 1.4876 0.5783 1.6901 Yes
14 RNA-dependent RNA-polymerase (RdRp) 1873 KIAVCNDFY 0.3108 1.3194 0.2603 1.5191 Yes
15 RNA-dependent RNA-polymerase (RdRp) 1957 NSPKGELNY 0.2818 1.1963 0.9389 1.4889 Yes
16 RNA-dependent RNA-polymerase (RdRp) 65 NSKMKISDY 0.2825 1.1993 0.6563 1.4501 Yes
17 RNA-dependent RNA-polymerase (RdRp) 860 LILRNFWLY 0.2591 1.1003 0.9534 1.3998 Yes
18 RNA-dependent RNA-polymerase (RdRp) 998 TSDINRTAV 0.3083 1.3091 0.4877 1.3925 Yes
19 RNA-dependent RNA-polymerase (RdRp) 1035 IAENITPVY 0.2376 1.0090 0.9454 1.2940 Yes
20 RNA-dependent RNA-polymerase (RdRp) 124 TSDDTSILS 0.3241 1.3760 0.1146 1.2758 Yes
21 RNA-dependent RNA-polymerase (RdRp) 1018 FSDSAIHYS 0.3104 1.3177 0.0885 1.2096 Yes
22 RNA-dependent RNA-polymerase (RdRp) 673 PMTTMICAY 0.2157 0.9159 0.9743 1.1908 Yes
23 RNA-dependent RNA-polymerase (RdRp) 301 LTDQLTKLK 0.2620 1.1125 0.4250 1.1883 Yes
24 RNA-dependent RNA-polymerase (RdRp) 1238 CLGSLGISY 0.1961 0.8326 0.9633 1.1146 Yes
25 RNA-dependent RNA-polymerase (RdRp) 1572 FLRITVLNY 0.1986 0.8432 0.6066 1.0815 Yes
26 RNA-dependent RNA-polymerase (RdRp) 1216 AIGKMRWVY 0.1880 0.7984 0.8941 1.0759 Yes
27 RNA-dependent RNA-polymerase (RdRp) 1809 GTDLYLFAK 0.2107 0.8944 0.9371 1.0368 Yes
28 RNA-dependent RNA-polymerase (RdRp) 443 LSEQDFLEL 0.2022 0.8585 0.9365 1.0334 Yes
29 RNA-dependent RNA-polymerase (RdRp) 533 KSYVVRQEY 0.1572 0.6675 0.9743 0.9789 Yes
30 RNA-dependent RNA-polymerase (RdRp) 1846 GSECYILLT 0.2273 0.9652 0.3029 0.9639 Yes
31 RNA-dependent RNA-polymerase (RdRp) 582 LADNIVPFF 0.1758 0.7465 0.5500 0.9522 Yes
32 RNA-dependent RNA-polymerase (RdRp) 90 HSCELTLLK 0.1856 0.7882 0.8303 0.9362 Yes
33 RNA-dependent RNA-polymerase (RdRp) 4 LNESTVNVY 0.1582 0.6718 0.8412 0.9224 Yes
34 RNA-dependent RNA-polymerase (RdRp) 513 KTRRVLEYY 0.1481 0.6288 0.9047 0.9199 Yes
35 RNA-dependent RNA-polymerase (RdRp) 1753 TTDATQKTH 0.2236 0.9495 0.0363 0.9089 Yes
36 RNA-dependent RNA-polymerase (RdRp) 1507 KVKKRIMLY 0.1384 0.5878 0.9637 0.8835 Yes
37 RNA-dependent RNA-polymerase (RdRp) 123 STSDDTSIL 0.1605 0.6813 0.9534 0.8785 Yes
38 RNA-dependent RNA-polymerase (RdRp) 1017 LFSDSAIHY 0.1340 0.5689 0.9766 0.8676 Yes
39 RNA-dependent RNA-polymerase (RdRp) 1490 RIDNTFWRM 0.1596 0.6776 0.9206 0.8431 Yes
40 RNA-dependent RNA-polymerase (RdRp) 147 FSNWYNLNK 0.1893 0.8037 0.1699 0.8422 Yes
41 RNA-dependent RNA-polymerase (RdRp) 1659 HVNRYNFVF 0.1307 0.5548 0.9463 0.8187 Yes
42 RNA-dependent RNA-polymerase (RdRp) 1133 ETSWNNMEI 0.1538 0.6530 0.7530 0.7878 Yes
43 RNA-dependent RNA-polymerase (RdRp) 719 WTMEAISLL 0.1445 0.6135 0.7919 0.7833 Yes
44 RNA-dependent RNA-polymerase (RdRp) 774 MLKEIRDAY 0.1271 0.5396 0.5776 0.7807 Yes
45 RNA-dependent RNA-polymerase (RdRp) 424 LSKRWTMYF 0.1179 0.5008 0.9002 0.7670 Yes
46 RNA-dependent RNA-polymerase (RdRp) 1628 ITFERLKNY 0.1096 0.4652 0.9555 0.7655 Yes
47 RNA-dependent RNA-polymerase (RdRp) 1266 SVSSRPMEF 0.1165 0.4946 0.8603 0.7622 Yes
48 RNA-dependent RNA-polymerase (RdRp) 31 GSCLLKRPY 0.1335 0.5669 0.3366 0.7576 Yes
49 RNA-dependent RNA-polymerase (RdRp) 1756 ATQKTHWDL 0.1400 0.5943 0.7633 0.7541 Yes
50 RNA-dependent RNA-polymerase (RdRp) 152 NLNKLILEF 0.1159 0.4921 0.9125 0.7512 Yes
51 Protein M2-1 74 GSTNVVQGY 0.3116 1.3232 0.9503 1.6056 Yes
52 Protein M2-1 125 ALHNLILSY 0.2421 1.0281 0.9773 1.3329 Yes
53 Protein M2-1 118 LSDSKHVAL 0.2554 1.0843 0.8215 1.2537 Yes
54 Protein M2-1 1 MSRKAPCKY 0.2184 0.9274 0.9570 1.2239 Yes
55 Protein M2-1 88 SITKAAACY 0.1471 0.6246 0.9202 0.9137 Yes
56 Protein M2-1 49 NTDRADGLS 0.2399 1.0187 0.0247 0.9087 Yes
57 Protein M2-1 19 SECKFNHNY 0.1271 0.5395 0.9175 0.8181 Yes
58 Major Surface glycoprotein 40 TLSIALNIY 0.3675 1.5603 0.5052 1.7825 Yes
59 Major Surface glycoprotein 192 QSDSSTTTQ 0.2732 1.1599 0.5201 1.2289 Yes
60 Protein M2-2 57 YLENIEIIY 0.5304 2.2520 0.9237 2.5292 Yes
61 Protein M2-2 50 HTNIYNCYL 0.2578 1.0944 0.7416 1.2458 Yes
62 Protein M2-2 46 IVKSHTNIY 0.1514 0.6429 0.9646 0.9403 Yes
63 Fusion glycoprotein 44 YTNVFTLEV 0.4776 2.0277 0.9175 2.1714 Yes
64 Fusion glycoprotein 36 LSVLRTGWY 0.3301 1.4015 0.4112 1.6130 Yes
65 Fusion glycoprotein 351 NINISTTNY 0.2734 1.1607 0.9230 1.4486 Yes
66 Fusion glycoprotein 417 TVTIDNTVY 0.2656 1.1277 0.9765 1.4175 Yes
67 Fusion glycoprotein 27 SCSTITEGY 0.1975 0.8384 0.6663 1.0797 Yes
68 Fusion glycoprotein 60 CSDGPSLIK 0.2035 0.8641 0.8596 1.0079 Yes
69 Fusion glycoprotein 311 CQNAGSTVY 0.1693 0.7189 0.9528 1.0025 Yes
70 Fusion glycoprotein 207 FSDNAGITP 0.2031 0.8625 0.2832 0.8963 Yes
71 Fusion glycoprotein 222 MTDAELARA 0.2004 0.8507 0.1426 0.8401 Yes
72 Fusion glycoprotein 40 RTGWYTNVF 0.1297 0.5507 0.9226 0.8212 Yes
73 Fusion glycoprotein 134 VTAIKNALK 0.1696 0.7199 0.2693 0.7781 Yes
74 Fusion glycoprotein 278 VIDTPCWIV 0.1432 0.6079 0.9342 0.7630 Yes
75 small hydrophobic Protein 44 FTITITINY 0.5909 2.5090 0.6752 2.7489 Yes
76 small hydrophobic Protein 85 TLDHDITQY 0.5399 2.2925 0.9616 2.5746 Yes
77 small hydrophobic Protein 159 HTVECHCIY 0.5046 2.1424 0.6370 2.3799 Yes
78 small hydrophobic Protein 150 KSKSAAEAY 0.2269 0.9632 0.8693 1.2541 Yes
79 small hydrophobic Protein 117 NQCTNITTY 0.2132 0.9052 0.9509 1.2067 Yes
80 small hydrophobic Protein 119 CTNITTYKF 0.2156 0.9154 0.9639 1.1764 Yes
81 small hydrophobic Protein 101 YTDSVINKD 0.2245 0.9532 0.2388 0.8940 Yes
82 small hydrophobic Protein 122 ITTYKFLCF 0.1323 0.5616 0.6580 0.7923 Yes
83 Matrix Protein 53 KTLTITTLY 0.5536 2.3503 0.9792 2.6510 Yes
84 Matrix Protein 189 LTQAKIAPY 0.4451 1.8897 0.6780 2.1428 Yes
85 Matrix Protein 108 TVCEVKTVY 0.2151 0.9134 0.9526 1.2113 Yes
86 Matrix Protein 91 NATVALDEY 0.1706 0.7244 0.8041 0.9963 Yes
87 Matrix Protein 14 YTAAVQVDL 0.1579 0.6702 0.9344 0.8496 Yes
88 Matrix Protein 1 MESYLVDTY 0.1400 0.5943 0.7565 0.8492 Yes
89 Phosphoprotein 128 FTPNEPGKY 0.5174 2.1968 0.9408 2.4803 Yes
90 Phosphoprotein 71 WTDKGGAIK 0.2623 1.1135 0.6608 1.2323 Yes
91 Phosphoprotein 154 DAESSILTF 0.1282 0.5444 0.9682 0.7877 Yes
92 Nucleoprotein 385 VSDDSQNDY 0.7524 3.1945 0.9771 3.4906 Yes
93 Nucleoprotein 244 FVNIFMQAY 0.5185 2.2016 0.8859 2.4805 Yes
94 Nucleoprotein 61 YAAEIGIQY 0.4334 1.8401 0.9454 2.1357 Yes
95 Nucleoprotein 53 YAKHADYKY 0.1795 0.7623 0.9077 1.0486 Yes
96 Nucleoprotein 5 GIHLSDLSY 0.1534 0.6514 0.9526 0.9371 Yes
97 Nucleoprotein 45 TLLCGEILY 0.1454 0.6173 0.9477 0.9069 Yes
98 Nucleoprotein 190 VLSDALKRY 0.1322 0.5612 0.9603 0.8619 Yes
99 Nucleoprotein 285 VTEVYDLVR 0.1457 0.6187 0.8939 0.8194 Yes
100 Nucleoprotein 51 ILYAKHADY 0.1086 0.4610 0.9769 0.7569 Yes
101 Nucleoprotein 281 ELKQVTEVY 0.1097 0.4656 0.9778 0.7568 Yes
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